FastQCFastQC Report
Wed 3 Jan 2024
SRR9595481_2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR9595481_2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26782536
Sequences flagged as poor quality0
Sequence length35-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG807880.3016443252423893No Hit
AGTATGGCCCGGGGGATCCGTATACGTTTCTAATTTGTAGTTAACGGTTG342540.1278967757198198No Hit
GTACTGGATGCATCTGCAGGATATCGCGGCCGCAGAAGACCTAAGCTAGC319570.11932029140182991No Hit
CCTGCCAGTAGTCATATGCTTGTCTCAAAGATTAAGCCATGCATGTGTAA302820.1130662159849239No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)