FastQCFastQC Report
Tue 19 Dec 2023
SRR12391903_1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR12391903_1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20777633
Sequences flagged as poor quality0
Sequence length35-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTGCCAGTAGTCATATGCTTGTCTCAAAGATTAAGCCATGCATGTGTAA345700.1663808384718317No Hit
CTGCCAGTAGTCATATGCTTGTCTCAAAGATTAAGCCATGCATGTGTAAG228310.10988258383426061No Hit
CCGCAGGCTCCACTCCTGGTGGTGCCCTTCCGTCAATTCCTTTAAGTTTC209740.10094508840347695No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)