BLAST

Biomacromolecule sequence alignment search too

BLAST Basic Local Alignment Search Tool, i.e., "Search tool based on local alignment algorithm", is a commonly used tool in bioinformatics. It can compare the input nucleic acid or protein sequences with known sequences in the database to obtain information such as sequence similarity. To determine the origin or evolutionary relationship of the sequence. Biotechnology Information (NCBI) is a set of primary structure sequence alignment procedures for biomacromolecules developed and managed by the National Center for Biotechnology Information (NCBI). The program can compare the input nucleic acid base or protein amino acid sequence with the known source sequence in the database, and output the homology information between the sequence, so as to assist the judgment of the input sequence source or evolutionary relationship with the known sequence.

JBrowse

Genome visualization tool

JBrowse Genome Browser is a genome browser open-source from the Generic Model Organism Database (GMOD) project. As a successor of GBrowse, JBrowse dynamically obtains data based on AJAX and can organism database quickly. Suitable for large-scale data presentation. At the same time, JBrowse is a genome visualization browser built on Javascript and HTML5 with strong scalability and can be installed and run locally.

Support a variety of formats genome data file import, including GFF3, BED, FASTA, Wiggle, BigWig, BAM, CRAM, VCF, REST, etc., according to the user selection of custom upload file, can intuitively display the genome sequence, annotation information, comparison results, etc.