Welcome to download data! All of data are available!

Date Type Download
Genome Rhododendron_williamsianum.genome.fa.tar.gz
Gene annotation Rhododendron_williamsianum.gff.tar.gz
CDS Rhododendron_williamsianum.cds.fa.tar.gz
Protein Rhododendron_williamsianum.protein.fa.tar.gz
GO annotation Rhododendron_williamsianum.go.txt
Gene family Rhododendron_williamsianum.genefamily.csv
SSR Rhododendron_williamsianum.ssr.txt

Publication: Soza VL, Lindsley D, Waalkes A, Ramage E, Patwardhan RP, Burton JN, Adey A, Kumar A, Qiu R, Shendure J, Hall B. The Rhododendron Genome and Chromosomal Organization Provide Insight into Shared Whole-Genome Duplications across the Heath Family (Ericaceae) . Genome Biol Evol. 2019 Dec 1; 11(12): 3353-3371. doi: 10.1093/gbe/evz245.

Date Type Download
Genome Rhododendron_simsii.genome.fa.tar.gz
Gene annotation Rhododendron_simsii.gff.tar.gz
CDS Rhododendron_simsii.cds.fa.tar.gz
Protein Rhododendron_simsii.protein.fa.tar.gz
GO annotation Rhododendron_simsii.go.txt
Gene family Rhododendron_simsii.genefamily.csv
SSR Rhododendron_simsii.ssr.txt

Publication: Yang FS, Nie S, Liu H, Shi TL, Tian XC, Zhou SS, Bao YT, Jia KH, Guo JF, Zhao W, An N, Zhang RG, Yun QZ, Wang XZ, Mannapperuma C, Porth I, El-Kassaby YA, Street NR, Wang XR, Van de Peer Y, Mao JF. Chromosome-level genome assembly of a parent species of widely cultivated azaleas . Nat Commun. 2020 Oct 19; 11(1): 5269. doi: 10.1038/s41467-020-18771-4.

Date Type Download
Genome Rhododendron_ovatum.genome.fa.tar.gz
Gene annotation Rhododendron_ovatum.gff3.tar.gz
CDS Rhododendron_ovatum.cds.fa.tar.gz
Protein Rhododendron_ovatum.pep.fa.tar.gz

Cooperator:

Publication: Wang X, Gao Y, Wu X, Wen X, Li D, Zhou H, Li Z, Liu B, Wei J, Chen F, Chen F, Zhang C, Zhang L, Xia Y. High‐quality evergreen azalea genome reveals tandem duplication‐facilitated low‐altitude adaptability and floral scent evolution . Plant Biotechnol J. 2021 Aug 10. doi: 10.1111/pbi.13680. Epub ahead of print.

Date Type Download
DNA RRhododendron_henanense.Genome.fasta.gz
GFF RRhododendron_henanense.gff.gz
RNA Rhododendron_henanense.rna.fasta.gz
Protein Rhododendron_henanense.protein.faa.gz

Publication: Zhou XJ, Li JT, Wang HL, Han JW, Zhang K, Dong SW, Zhang YZ, Ya HY, Cheng YW, Sun SS. The chromosome-scale genome assembly, annotation and evolution of Rhododendron henanense subsp. lingbaoense. Mol Ecol Resour. 2021 Oct 15; doi: 10.1111/1755-0998.13529.

Date Type Download
Genome Rhododendron_williamsianum.genome.fa.tar.gz
Gene annotation Rhododendron_williamsianum.gff.tar.gz
CDS Rhododendron_williamsianum.cds.fa.tar.gz
Protein Rhododendron_williamsianum.protein.fa.tar.gz
GO annotation Rhododendron_williamsianum.go.txt
Gene family Rhododendron_williamsianum.genefamily.csv
SSR Rhododendron_williamsianum.ssr.txt

Publication: Soza VL, Lindsley D, Waalkes A, Ramage E, Patwardhan RP, Burton JN, Adey A, Kumar A, Qiu R, Shendure J, Hall B. The Rhododendron Genome and Chromosomal Organization Provide Insight into Shared Whole-Genome Duplications across the Heath Family (Ericaceae) . Genome Biol Evol. 2019 Dec 1; 11(12): 3353-3371. doi: 10.1093/gbe/evz245.

Homology
Data Type Download
Orthologous SingleCopyOrthogroups.tar.gz
Syntenic Block syn.csv
Transcriptom data
Project Download
PRJNA503304 Rhododendron_delavayi.PRJNA503304.drought.fpkm.csv
PRJNA476831 Rhododendron_delavayi.PRJNA476831.bud.fpkm.csv
GO Enrichment
Species Download
Rhododendron delavayi org.Rdelavayi.eg.db.tar.gz
Rhododendron williamsianum org.Rwilliamsianum.eg.db.tar.gz
Rhododendron simsii org.Rsimsii.eg.db.tar.gz
KEGG Enrichment
Species Download
Rhododendron delavayi Rdelavayi.kegg_info.RData
Rhododendron williamsianum Rwilliamsianum.kegg_info.RData
Rhododendron simsii Rsimsii.kegg_info.RData
Chloroplast Genome
Project Download
MN413198(Rhododendron delavayi) Rhododendron_delavayi.chloroplast.genome.fa
MN711645(Rhododendron delavayi) Rhododendron_delavayi.chloroplast.genome.fa
MN182619(Rhododendron pulchrum) Rhododendron_pulchrum.chloroplast.genome.fa